BBSC Analysis Pipeline

A Command-Line Interface developed by Bioinformatics Core allowing IMB users to perform the standard analysis pipeline on our server by their own. This platform could help the users better understand the analysis process and the working scripts, as well as save time waiting in queue for service.

3 Steps

1

Access to IMB server

2

Run BBSC Portal

3

Visit BBSC RShiny Apps

1 - Access to IMB server

a. Use some free SSH tools:
MobaXterm / Putty / Linux Terminal / Mac Terminal

Command: ssh bc.imb.sinica.edu.tw

Port: 22

Login: IMB username and password
     [Contact Bioinformatics Core if you don't have it.]

b. Login screen
Now you access to our Core server. Next, please enter the other child nodes (bbsc197; bbsc198; bbsc199; bbsc200) which has more computational power.

Command: ssh bbsc200

bbsc@bbsc200:~$



Now you are good to go!!

2 - Run BBSC portal

a. Start bbsc_portal

Command: bbsc_portal

b. Select your analyses:

3 - Visit  BBSC RShiny Apps